STRINGSTRING
Solyc12g015830.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc12g015830.1.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc12g015830.1.1Uncharacterized protein (156 aa)    
Predicted Functional Partners:
Solyc02g082200.2.1
Uncharacterized protein (176 aa)
 
 
  0.940
Solyc06g067960.2.1
Uncharacterized protein (170 aa)
 
 
  0.939
GRX1
SlGRX1 protein (292 aa)
 
 
  0.939
Solyc02g078360.2.1
Uncharacterized protein (296 aa)
   
 
  0.920
Solyc11g005360.1.1
Uncharacterized protein (92 aa)
     
 
0.663
Solyc08g075730.2.1
Fe-S cluster assembly protein DRE2 homolog ; Component of the cytosolic iron-sulfur (Fe-S) protein assembly (CIA) machinery. Required for the maturation of extramitochondrial Fe-S proteins. Part of an electron transfer chain functioning in an early step of cytosolic Fe-S biogenesis. Electrons are transferred to the Fe-S cluster from NADPH via a FAD- and FMN-containing diflavin oxidoreductase. Has anti- apoptotic effects in the cell (267 aa)
     
 
  0.618
Solyc03g119420.2.1
Fe-S cluster assembly protein DRE2 homolog ; Component of the cytosolic iron-sulfur (Fe-S) protein assembly (CIA) machinery. Required for the maturation of extramitochondrial Fe-S proteins. Part of an electron transfer chain functioning in an early step of cytosolic Fe-S biogenesis. Electrons are transferred to the Fe-S cluster from NADPH via a FAD- and FMN-containing diflavin oxidoreductase. Has anti- apoptotic effects in the cell (264 aa)
     
 
  0.618
Solyc02g076720.2.1
Uncharacterized protein (1459 aa)
         
  0.525
Solyc01g107270.2.1
Uncharacterized protein (1333 aa)
         
  0.525
Solyc11g006920.1.1
Uncharacterized protein (123 aa)
     
 
  0.470
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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