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STRINGSTRING
Solyc12g015910.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc12g015910.1.1" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc12g015910.1.1annotation not available (353 aa)    
Predicted Functional Partners:
Solyc02g078360.2.1
annotation not available (296 aa)
   
 
  0.912
GRX1
SlGRX1 protein (292 aa)
   
 
  0.884
101244248
CAX interacting protein 1 (176 aa)
   
 
  0.882
101263959
BolA-like family protein; Belongs to the BolA/IbaG family (92 aa)
     
 
0.855
101266646
Uncharacterized protein; Glutaredoxin 4 (170 aa)
   
 
  0.855
101259472
Anamorsin homolog; Component of the cytosolic iron-sulfur (Fe-S) protein assembly (CIA) machinery. Required for the maturation of extramitochondrial Fe-S proteins. Part of an electron transfer chain functioning in an early step of cytosolic Fe-S biogenesis. Electrons are transferred to the Fe-S cluster from NADPH via a FAD- and FMN-containing diflavin oxidoreductase. Has anti- apoptotic effects in the cell; Belongs to the anamorsin family (267 aa)
     
 
  0.803
101253469
Anamorsin homolog; Component of the cytosolic iron-sulfur (Fe-S) protein assembly (CIA) machinery. Required for the maturation of extramitochondrial Fe-S proteins. Part of an electron transfer chain functioning in an early step of cytosolic Fe-S biogenesis. Electrons are transferred to the Fe-S cluster from NADPH via a FAD- and FMN-containing diflavin oxidoreductase. Has anti- apoptotic effects in the cell; Belongs to the anamorsin family (264 aa)
     
 
  0.803
101250891
Uncharacterized protein; Chloroplastic NIFS-like cysteine desulfurase (477 aa)
     
   
  0.763
Solyc02g091900.2.1
Uncharacterized protein; Nitrogen fixation S (NIFS)-like 1 (343 aa)
     
   
  0.763
Solyc12g007010.1.1
Uncharacterized protein; ATP binding (535 aa)
     
   
  0.697
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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