STRINGSTRING
Solyc12g016040.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc12g016040.1.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc12g016040.1.1Uncharacterized protein (75 aa)    
Predicted Functional Partners:
Solyc12g056940.1.1
Uncharacterized protein (2210 aa)
   
  0.979
Solyc01g096490.2.1
Uncharacterized protein (1633 aa)
     
  0.856
Solyc05g018300.2.1
Uncharacterized protein (1080 aa)
     
  0.818
Solyc12g007100.1.1
Uncharacterized protein (483 aa)
     
  0.790
Solyc12g044540.1.1
Uncharacterized protein (255 aa)
   
  0.710
Solyc12g096520.1.1
Uncharacterized protein (293 aa)
   
  0.707
Solyc12g096020.1.1
Uncharacterized protein (508 aa)
   
  0.707
Solyc12g042570.1.1
Uncharacterized protein (334 aa)
   
  0.707
Solyc12g010450.1.1
Uncharacterized protein (316 aa)
   
  0.707
Solyc10g085370.1.1
Uncharacterized protein (453 aa)
   
  0.707
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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