STRINGSTRING
Solyc12g016190.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc12g016190.1.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc12g016190.1.1Uncharacterized protein (316 aa)    
Predicted Functional Partners:
Solyc06g060120.2.1
Uncharacterized protein (791 aa)
     
  0.961
Solyc04g082760.2.1
Uncharacterized protein (489 aa)
     
  0.961
Solyc03g097450.2.1
Uncharacterized protein (573 aa)
     
  0.961
Solyc01g109510.2.1
Uncharacterized protein (945 aa)
     
  0.961
Solyc03g111250.2.1
Uncharacterized protein (526 aa)
       
  0.960
Solyc02g068100.2.1
Uncharacterized protein (544 aa)
       
  0.960
Solyc12g037980.1.1
Uncharacterized protein (435 aa)
     
 
  0.945
Solyc01g079690.2.1
Uncharacterized protein (995 aa)
     
 
  0.936
Solyc11g072860.1.1
Histone H4 ; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling (103 aa)
     
  0.932
Solyc11g072840.1.1
Histone H4 ; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling (103 aa)
     
  0.932
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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