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Solyc12g017250.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc12g017250.1.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc12g017250.1.1Uncharacterized protein (137 aa)    
Predicted Functional Partners:
PSBR
Photosystem II 10 kDa polypeptide, chloroplastic ; Associated with the oxygen-evolving complex of photosystem II (138 aa)
         
 
0.800
Solyc06g063370.2.1
Type I (26 kD) CP29 polypeptide (286 aa)
     
   
  0.546
Solyc02g069460.2.1
Uncharacterized protein (228 aa)
     
   
  0.536
Solyc02g069450.2.1
Uncharacterized protein (246 aa)
     
   
  0.536
CAP10B
Chlorophyll a-b binding protein CP24 10B, chloroplastic (256 aa)
     
   
  0.534
CAP10A
Chlorophyll a-b binding protein CP24 10A, chloroplastic (256 aa)
     
   
  0.534
Solyc07g066150.1.1
Uncharacterized protein (146 aa)
     
   
  0.520
Solyc06g084050.2.1
Uncharacterized protein (128 aa)
     
   
  0.446
Solyc12g011280.1.1
Uncharacterized protein (273 aa)
     
   
  0.429
CAB8
Chlorophyll a-b binding protein 8, chloroplastic ; The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated (273 aa)
     
   
  0.429
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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