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Solyc12g017400.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc12g017400.1.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc12g017400.1.1Uncharacterized protein; NAC (No Apical Meristem) domain transcriptional regulator superfamily protein (319 aa)    
Predicted Functional Partners:
101248427
annotation not available (393 aa)
           
  0.603
101258682
Kinesin-like protein; Armadillo repeat kinesin 3; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family (906 aa)
           
  0.603
101255150
Uncharacterized protein; GRAS family transcription factor; Belongs to the GRAS family (826 aa)
           
  0.567
101262101
ATP-dependent Clp protease proteolytic subunit; Nuclear-encoded CLP protease P7 (236 aa)
           
  0.561
tbn1
Endonuclease 1 (302 aa)
           
  0.554
101245930
Uncharacterized protein; AIG2-like (avirulence induced gene) family protein (194 aa)
           
  0.550
101255832
Kinesin-like protein; Armadillo repeat kinesin 2; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family (880 aa)
           
  0.521
Solyc03g096300.2.1
annotation not available (158 aa)
           
  0.514
101260510
annotation not available (400 aa)
           
  0.455
101268829
annotation not available (405 aa)
           
  0.455
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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