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Solyc12g017420.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc12g017420.1.1" - ABC transporter family protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc12g017420.1.1ABC transporter family protein (705 aa)    
Predicted Functional Partners:
101251822
Uncharacterized protein; Peroxin 5 (744 aa)
     
   
  0.951
101253171
Uncharacterized protein; enoyl-CoA hydratase 2 (310 aa)
     
 
  0.906
101265549
Thioesterase superfamily protein (165 aa)
     
 
  0.906
101252997
annotation not available (248 aa)
     
 
  0.896
Solyc12g040500.1.1
annotation not available (233 aa)
     
 
  0.873
Solyc12g040480.1.1
annotation not available (173 aa)
     
 
  0.873
Solyc03g119030.2.1
annotation not available (287 aa)
     
 
  0.873
101254504
Uncharacterized protein; Translation initiation factor 2, small GTP-binding protein (1010 aa)
     
        0.865
101246367
Plastid-lipid associated protein PAP / fibrillin family protein (398 aa)
     
        0.846
101260717
Uncharacterized protein; Peroxisomal ABC transporter 1 (1344 aa)
     
 
0.806
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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