STRINGSTRING
Solyc12g019010.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc12g019010.1.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc12g019010.1.1Uncharacterized protein (256 aa)    
Predicted Functional Partners:
Solyc09g091570.2.1
Uncharacterized protein (505 aa)
     
  0.972
Solyc01g105460.2.1
Uncharacterized protein (391 aa)
   
 
  0.961
Solyc01g068640.2.1
Uncharacterized protein (604 aa)
   
 
  0.957
Solyc07g042150.2.1
Uncharacterized protein (309 aa)
     
 
  0.938
Solyc10g006650.2.1
Uncharacterized protein (203 aa)
       
    0.901
Solyc10g005430.2.1
Uncharacterized protein (204 aa)
       
    0.901
Solyc06g076880.2.1
Uncharacterized protein (202 aa)
       
    0.901
Solyc03g034140.2.1
Uncharacterized protein (236 aa)
       
    0.901
Solyc01g109420.2.1
Uncharacterized protein (253 aa)
       
    0.901
Solyc01g109400.2.1
Uncharacterized protein (241 aa)
       
    0.901
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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