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STRINGSTRING
Solyc12g019610.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc12g019610.1.1" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc12g019610.1.1annotation not available (249 aa)    
Predicted Functional Partners:
Solyc03g123840.2.1
Uncharacterized protein; RNA-binding (RRM/RBD/RNP motifs) family protein (320 aa)
           
  0.763
101263666
ARM repeat superfamily protein (2023 aa)
     
 
  0.759
101267960
Kinesin-like calmodulin-binding protein (ZWICHEL); Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family (1265 aa)
     
 
  0.754
101260712
Tubulin gamma chain; Tubulin is the major constituent of microtubules. The gamma chain is found at microtubule organizing centers (MTOC) such as the spindle poles or the centrosome (474 aa)
     
 
  0.752
101256302
DNA helicase; Minichromosome maintenance (MCM2/3/5) family protein; Belongs to the MCM family (737 aa)
     
        0.695
101243636
DNA helicase; Minichromosome maintenance (MCM2/3/5) family protein; Belongs to the MCM family (718 aa)
     
        0.655
101265455
ATP binding;protein kinases;protein serine/threonine kinases (529 aa)
     
 
  0.632
Solyc06g051040.2.1
Uncharacterized protein; Mad3/BUB1 homology region 1 (588 aa)
     
 
  0.632
101246051
Uncharacterized protein; BUB1-related (BUB1- budding uninhibited by benzymidazol 1) (389 aa)
     
 
  0.632
101264414
Transducin family protein / WD-40 repeat family protein (989 aa)
     
   
  0.630
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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