STRINGSTRING
Solyc12g021170.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc12g021170.1.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc12g021170.1.1Uncharacterized protein (608 aa)    
Predicted Functional Partners:
Solyc09g089880.2.1
Uncharacterized protein (251 aa)
 
 
  0.923
Solyc12g005200.1.1
Uncharacterized protein (354 aa)
 
 
  0.923
Solyc10g007420.2.1
Uncharacterized protein (425 aa)
     
 
  0.675
Solyc10g007240.1.1
Uncharacterized protein (594 aa)
     
 
  0.675
Solyc10g007230.1.1
Uncharacterized protein (596 aa)
     
 
  0.675
Solyc01g017740.1.1
Uncharacterized protein (97 aa)
   
   
  0.648
Solyc06g073560.2.1
Uncharacterized protein (412 aa)
   
   
  0.642
Solyc11g069180.1.1
Uncharacterized protein (412 aa)
   
   
  0.640
Solyc12g099440.1.1
Uncharacterized protein (727 aa)
   
   
  0.577
Solyc12g007170.1.1
Uncharacterized protein (724 aa)
   
   
  0.577
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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