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Solyc12g021230.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc12g021230.1.1" - DNA gyrase subunit B in Solanum lycopersicum
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc12g021230.1.1DNA gyrase subunit B ; A type II topoisomerase that negatively supercoils closed circular double-stranded DNA in an ATP-dependent manner (729 aa)    
Predicted Functional Partners:
Solyc01g096900.2.1
Uncharacterized protein (953 aa)
  0.988
Solyc01g087500.2.1
DNA topoisomerase 2 ; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double-strand breaks (1478 aa)
   
0.962
Solyc07g049720.2.1
Uncharacterized protein (881 aa)
     
 
  0.961
Solyc02g087980.2.1
Structural maintenance of chromosomes protein (1246 aa)
     
 
  0.923
Solyc02g067290.2.1
Uncharacterized protein (92 aa)
     
 
  0.923
Solyc07g062780.2.1
Uncharacterized protein (255 aa)
       
 
  0.889
Solyc03g093260.2.1
Uncharacterized protein (552 aa)
     
 
  0.860
Solyc03g093250.1.1
Uncharacterized protein (647 aa)
     
 
  0.860
pcna
Proliferating cell nuclear antigen ; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase’s processibility during elongation of the leading strand (264 aa)
   
  0.836
Solyc02g087710.2.1
Uncharacterized protein (639 aa)
     
 
  0.824
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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