STRINGSTRING
Solyc12g021280.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc12g021280.1.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc12g021280.1.1Uncharacterized protein (555 aa)    
Predicted Functional Partners:
Solyc06g076860.2.1
Uncharacterized protein (532 aa)
     
  0.975
wee1
Protein kinase WEE1 (510 aa)
     
  0.974
Solyc08g081280.2.1
Uncharacterized protein (419 aa)
     
  0.972
Solyc06g073510.2.1
Uncharacterized protein (363 aa)
     
  0.969
Solyc00g023270.1.1
Annotation not available (179 aa)
     
  0.969
Solyc03g006420.2.1
Uncharacterized protein (831 aa)
     
  0.968
Solyc02g062680.2.1
Anaphase-promoting complex subunit 10 ; Component of the anaphase promoting complex/cyclosome (APC/C), a cell cycle-regulated E3 ubiquitin-protein ligase complex that controls progression through mitosis and the G1 phase of the cell cycle (191 aa)
     
  0.967
Solyc08g077990.2.1
Uncharacterized protein (1016 aa)
     
  0.959
Solyc12g088530.1.1
Uncharacterized protein (354 aa)
     
  0.957
Solyc12g088520.1.1
Uncharacterized protein (355 aa)
     
  0.957
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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