STRINGSTRING
Solyc12g027560.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc12g027560.1.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc12g027560.1.1Uncharacterized protein (89 aa)    
Predicted Functional Partners:
Solyc01g096600.2.1
Uncharacterized protein (608 aa)
     
      0.621
Solyc04g078830.2.1
Uncharacterized protein (802 aa)
     
      0.615
eIF-5A4
Eukaryotic translation initiation factor 5A-4 ; The precise role of eIF-5A in protein biosynthesis is not known but it functions by promoting the formation of the first peptide bond (160 aa)
       
 
  0.596
eIF-5A2
Eukaryotic translation initiation factor 5A-2 ; The precise role of eIF-5A in protein biosynthesis is not known but it functions by promoting the formation of the first peptide bond (160 aa)
       
 
  0.596
Solyc05g006890.1.1
Eukaryotic translation initiation factor 5A (159 aa)
       
 
  0.596
Solyc04g005510.2.1
Eukaryotic translation initiation factor 5A (159 aa)
       
 
  0.596
eIF-5A1
Eukaryotic translation initiation factor 5A-1 ; The precise role of eIF-5A in protein biosynthesis is not known but it functions by promoting the formation of the first peptide bond (162 aa)
       
 
  0.596
eIF-5A3
Eukaryotic translation initiation factor 5A-3 ; The precise role of eIF-5A in protein biosynthesis is not known but it functions by promoting the formation of the first peptide bond (159 aa)
       
 
  0.596
Solyc05g017890.2.1
Uncharacterized protein (1858 aa)
     
      0.530
Solyc01g056520.2.1
Uncharacterized protein (1052 aa)
     
   
  0.516
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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