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atpF protein (Solanum lycopersicum) - STRING interaction network
"atpF" - ATP synthase subunit b, chloroplastic in Solanum lycopersicum
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Score
atpFATP synthase subunit b, chloroplastic; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation (60 aa)    
Predicted Functional Partners:
109120519
annotation not available (223 aa)
         
    0.800
101263124
annotation not available (223 aa)
         
    0.800
101268297
Uncharacterized protein; Photosystem I reaction center subunit PSI-N, chloroplast, putative / PSI-N, putative (PSAN) (163 aa)
           
  0.730
rpoC1
DNA-directed RNA polymerase subunit beta’; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates; Belongs to the RNA polymerase beta’ chain family. RpoC1 subfamily (113 aa)
           
  0.713
101249338
annotation not available (213 aa)
         
    0.650
101263674
annotation not available (769 aa)
         
    0.650
101264469
annotation not available (294 aa)
         
    0.650
101266444
Uncharacterized protein; Pyrophosphorylase 4 (216 aa)
         
    0.650
101258580
annotation not available (205 aa)
         
    0.650
vp1.1
Uncharacterized protein; Vacuolar-type H+-pyrophosphatase (765 aa)
         
    0.650
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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