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Solyc12g027870.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc12g027870.1.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc12g027870.1.1Uncharacterized protein; Cyclin-dependent kinase E;1; Belongs to the protein kinase superfamily (336 aa)    
Predicted Functional Partners:
101261458
Uncharacterized protein; RNA polymerase II transcription mediators (1791 aa)
     
 
  0.977
101246089
Uncharacterized protein; RNA polymerase II transcription mediators (2262 aa)
     
 
  0.971
101252599
annotation not available (250 aa)
     
 
  0.967
101262307
Mediator of RNA polymerase II transcription subunit 7; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene-specific regulatory proteins to the basal RNA polymerase II transcription machinery (168 aa)
     
 
  0.963
101256647
Uncharacterized protein; Mediator 21 (138 aa)
     
 
  0.933
101259273
annotation not available (201 aa)
     
 
  0.924
Solyc12g044640.1.1
annotation not available (249 aa)
     
 
  0.914
Solyc03g121210.2.1
annotation not available (232 aa)
     
 
  0.914
Solyc05g016460.1.1
annotation not available (651 aa)
     
 
  0.903
Solyc05g016440.2.1
annotation not available (1011 aa)
     
 
  0.903
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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