STRINGSTRING
Solyc12g032970.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc12g032970.1.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc12g032970.1.1Uncharacterized protein (93 aa)    
Predicted Functional Partners:
Solyc12g062590.1.1
Uncharacterized protein (135 aa)
   
          0.526
Solyc12g032980.1.1
Uncharacterized protein (131 aa)
   
          0.523
Solyc07g021250.1.1
Uncharacterized protein (70 aa)
   
          0.515
Solyc10g017900.1.1
Uncharacterized protein (141 aa)
   
          0.512
Solyc12g033060.1.1
Uncharacterized protein (273 aa)
   
          0.509
Solyc07g021270.1.1
Uncharacterized protein (109 aa)
   
          0.509
Solyc12g032960.1.1
Uncharacterized protein (84 aa)
   
          0.508
Solyc09g059640.1.1
Uncharacterized protein (112 aa)
   
          0.507
Solyc05g041230.1.1
Uncharacterized protein (98 aa)
   
          0.506
Solyc12g035740.1.1
Uncharacterized protein (148 aa)
   
          0.504
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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