STRINGSTRING
Solyc12g032990.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc12g032990.1.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc12g032990.1.1Uncharacterized protein (181 aa)    
Predicted Functional Partners:
Solyc07g021230.1.1
Uncharacterized protein (199 aa)
 
          0.723
Solyc12g033050.1.1
Uncharacterized protein (198 aa)
 
          0.609
Solyc12g032980.1.1
Uncharacterized protein (131 aa)
 
          0.582
Solyc12g035580.1.1
Uncharacterized protein (52 aa)
   
          0.526
Solyc09g059640.1.1
Uncharacterized protein (112 aa)
   
          0.526
Solyc07g021250.1.1
Uncharacterized protein (70 aa)
   
          0.526
Solyc02g036320.1.1
Uncharacterized protein (63 aa)
   
          0.526
psaA
Photosystem I P700 apoprotein A1; PsaA and PsaB bind P700, the primary electron donor of photosystem I (PSI), as well as the electron acceptors A0, A1 and FX. PSI is a plastocyanin-ferredoxin oxidoreductase, converting photonic excitation into a charge separation, which transfers an electron from the donor P700 chlorophyll pair to the spectroscopically characterized acceptors A0, A1, FX, FA and FB in turn. Oxidized P700 is reduced on the lumenal side of the thylakoid membrane by plastocyanin (135 aa)
   
          0.521
Solyc12g033000.1.1
Uncharacterized protein (142 aa)
   
          0.520
Solyc09g015320.1.1
Uncharacterized protein (230 aa)
   
          0.520
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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