STRINGSTRING
Solyc12g035450.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc12g035450.1.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc12g035450.1.1Uncharacterized protein (172 aa)    
Predicted Functional Partners:
CYP51
Obtusifoliol 14alpha-demethylase (487 aa)
     
 
  0.850
Solyc08g079570.2.1
Uncharacterized protein (296 aa)
     
 
  0.823
Solyc06g076410.2.1
C-4 methyl sterol oxidase (269 aa)
     
 
  0.823
Solyc06g005750.2.1
Uncharacterized protein (265 aa)
     
 
  0.823
Solyc01g091320.2.1
Uncharacterized protein (300 aa)
     
 
  0.823
Solyc02g086190.1.1
Uncharacterized protein (257 aa)
     
 
  0.782
Solyc02g086180.2.1
Uncharacterized protein (271 aa)
     
 
  0.782
Solyc02g063240.2.1
Uncharacterized protein (271 aa)
     
 
  0.782
Solyc12g021130.1.1
Reticulon-like protein (577 aa)
     
 
  0.756
Solyc04g082750.2.1
Uncharacterized protein (478 aa)
     
 
  0.756
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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