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101253869 protein (Solanum lycopersicum) - STRING interaction network
"101253869" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
101253869Uncharacterized protein; SAC3/GANP/Nin1/mts3/eIF-3 p25 family (1565 aa)    
Predicted Functional Partners:
101261518
Uncharacterized protein; THO2 (1858 aa)
     
 
  0.988
101245076
Proteasome family protein (415 aa)
       
 
  0.977
Solyc02g068110.2.1
Transcription and mRNA export factor ENY2; Involved in mRNA export coupled transcription activation by association with both the TREX-2 and the SAGA complexes. The transcription regulatory histone acetylation (HAT) complex SAGA is a multiprotein complex that activates transcription by remodeling chromatin and mediating histone acetylation and deubiquitination. Within the SAGA complex, participates to a subcomplex that specifically deubiquitinates histones. The SAGA complex is recruited to specific gene promoters by activators, where it is required for transcription. The TREX-2 complex [...] (71 aa)
       
 
  0.940
101247869
annotation not available (350 aa)
       
 
  0.903
Solyc06g053590.2.1
annotation not available (599 aa)
     
 
  0.871
Solyc06g053570.2.1
annotation not available (781 aa)
     
 
  0.871
CNOT1
Uncharacterized protein; Transcription regulators (2411 aa)
     
        0.861
Solyc03g115840.2.1
Uncharacterized protein; DNAJ heat shock N-terminal domain-containing protein (720 aa)
           
  0.851
101266268
Calcium-binding EF-hand family protein (123 aa)
       
 
  0.848
101247664
annotation not available (146 aa)
       
 
  0.848
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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