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Solyc12g036200.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc12g036200.1.1" - Peptidylprolyl isomerase in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc12g036200.1.1Peptidylprolyl isomerase (178 aa)    
Predicted Functional Partners:
Solyc12g035870.1.1
Uncharacterized protein (398 aa)
       
 
  0.794
Solyc12g099800.1.1
Uncharacterized protein (303 aa)
   
     
  0.743
Solyc01g098230.2.1
Uncharacterized protein (498 aa)
       
      0.720
Solyc01g009050.2.1
Uncharacterized protein (670 aa)
     
 
  0.716
Solyc09g031600.2.1
Uncharacterized protein (473 aa)
       
      0.669
Solyc06g050550.2.1
Uncharacterized protein (541 aa)
       
      0.669
Solyc11g071890.1.1
Uncharacterized protein (360 aa)
   
 
  0.629
Solyc11g062070.1.1
Uncharacterized protein (698 aa)
   
 
  0.629
Solyc10g079290.1.1
Uncharacterized protein (702 aa)
   
 
  0.629
Solyc06g076360.2.1
Uncharacterized protein (812 aa)
   
 
  0.629
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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