STRINGSTRING
Solyc12g037980.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc12g037980.1.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc12g037980.1.1Uncharacterized protein (435 aa)    
Predicted Functional Partners:
Solyc04g016370.2.1
Uncharacterized protein (1539 aa)
     
  0.987
Solyc11g069370.1.1
RuvB-like helicase (455 aa)
     
  0.983
Solyc06g062350.2.1
RuvB-like helicase (455 aa)
     
  0.983
Solyc11g013430.1.1
Uncharacterized protein (150 aa)
     
  0.978
Solyc11g013410.1.1
Uncharacterized protein (94 aa)
     
  0.978
Solyc11g013400.1.1
Uncharacterized protein (209 aa)
     
  0.978
Solyc03g111250.2.1
Uncharacterized protein (526 aa)
     
  0.976
Solyc02g068100.2.1
Uncharacterized protein (544 aa)
     
  0.976
Solyc03g032070.2.1
RuvB-like helicase (469 aa)
     
  0.973
Solyc09g089660.2.1
Uncharacterized protein (539 aa)
       
  0.972
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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