STRINGSTRING
Solyc12g038600.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc12g038600.1.1" - Rhomboid-like protein in Solanum lycopersicum
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc12g038600.1.1Rhomboid-like protein (190 aa)    
Predicted Functional Partners:
Solyc03g083440.2.1
Uncharacterized protein (2226 aa)
     
   
  0.633
Solyc03g063560.2.1
Uncharacterized protein (1621 aa)
     
   
  0.570
CNX5
Molybdenum cofactor synthesis protein 3 ; Plays a central role in 2-thiolation of mcm(5)S(2)U at tRNA wobble positions of cytosolic tRNA(Lys), tRNA(Glu) and tRNA(Gln). Also essential during biosynthesis of the molybdenum cofactor. Acts by mediating the C-terminal thiocarboxylation of sulfur carriers URM1 and MOCS2A. Its N-terminus first activates URM1 and MOCS2A as acyl-adenylates (-COAMP), then the persulfide sulfur on the catalytic cysteine is transferred to URM1 and MOCS2A to form thiocarboxylation (-COSH) of their C-terminus. The reaction probably involves hydrogen sulfide that is [...] (460 aa)
   
   
  0.480
Solyc12g099700.1.1
Uncharacterized protein (542 aa)
         
  0.468
Solyc11g070010.1.1
Uncharacterized protein (393 aa)
     
 
  0.465
Solyc11g069980.1.1
Uncharacterized protein (799 aa)
     
 
  0.465
Solyc11g043210.1.1
Uncharacterized protein (551 aa)
     
 
  0.465
Solyc11g043200.1.1
Uncharacterized protein (229 aa)
     
 
  0.465
Solyc11g043170.1.1
Uncharacterized protein (163 aa)
     
 
  0.465
Solyc11g039650.1.1
Uncharacterized protein (919 aa)
     
 
  0.465
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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