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101268074 protein (Solanum lycopersicum) - STRING interaction network
"101268074" - Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
101268074Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein (155 aa)    
Predicted Functional Partners:
101246000
H/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1 (194 aa)
     
 
  0.999
101259995
Pseudouridine synthase family protein (539 aa)
   
 
  0.995
Solyc02g081810.2.1
Uncharacterized protein; Homologue of NAP57 (597 aa)
   
 
  0.995
101261490
annotation not available (314 aa)
     
 
  0.995
Solyc07g054460.2.1
Uncharacterized protein; Nuclear assembly factor 1 (778 aa)
     
 
  0.994
101250547
annotation not available (553 aa)
   
 
  0.992
101255995
annotation not available (513 aa)
   
 
  0.987
Solyc09g083080.2.1
annotation not available (552 aa)
   
 
  0.987
Solyc02g069770.2.1
annotation not available (516 aa)
     
 
  0.986
BMS1
Uncharacterized protein; P-loop containing nucleoside triphosphate hydrolases superfamily protein (1231 aa)
     
 
  0.983
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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