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STRINGSTRING
Solyc12g040500.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc12g040500.1.1" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc12g040500.1.1annotation not available (233 aa)    
Predicted Functional Partners:
101260717
Uncharacterized protein; Peroxisomal ABC transporter 1 (1344 aa)
     
 
  0.990
101252586
Peroxisome biogenesis protein 12; Required for peroxisome biogenesis and for PTS1- and PTS2-dependent protein import into peroxisomes (393 aa)
     
 
  0.981
101252997
annotation not available (248 aa)
     
 
  0.957
101251822
Uncharacterized protein; Peroxin 5 (744 aa)
     
 
  0.956
101248207
annotation not available (359 aa)
     
 
  0.895
101266867
annotation not available (368 aa)
     
 
  0.895
101253171
Uncharacterized protein; enoyl-CoA hydratase 2 (310 aa)
     
   
  0.879
101265549
Thioesterase superfamily protein (165 aa)
     
   
  0.879
Solyc12g017420.1.1
ABC transporter family protein (705 aa)
     
 
  0.873
101244156
Uncharacterized protein; DNA-directed RNA polymerase, RBP11-like (116 aa)
     
        0.828
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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