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STRINGSTRING
101263499 protein (Solanum lycopersicum) - STRING interaction network
"101263499" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
101263499annotation not available (379 aa)    
Predicted Functional Partners:
101255831
Uncharacterized protein; Structural maintenance of chromosomes 5 (1050 aa)
     
 
  0.957
101262030
RING/U-box superfamily protein (255 aa)
     
 
  0.949
Solyc10g018870.1.1
CONTAINS InterPro DOMAIN/s- MAGE protein (InterPro-IPR002190); Has 1274 Blast hits to 1260 proteins in 85 species- Archae - 0; Bacteria - 0; Metazoa - 1104; Fungi - 45; Plants - 49; Viruses - 0; Other Eukaryotes - 76 (source- NCBI BLink) (175 aa)
     
 
  0.948
101257695
Uncharacterized protein; Embryo defective 1379 (312 aa)
     
 
  0.948
101253591
annotation not available (1054 aa)
     
 
  0.944
101264663
DNA repair and meiosis protein (Mre11); Belongs to the MRE11/RAD32 family (731 aa)
     
        0.843
Solyc06g073780.2.1
Structural maintenance of chromosomes protein; SMC3 (1229 aa)
     
 
  0.755
101244926
Structural maintenance of chromosome 3 (1246 aa)
     
 
  0.654
Solyc02g067300.2.1
annotation not available (53 aa)
     
 
  0.654
Solyc02g067290.2.1
annotation not available (92 aa)
     
 
  0.654
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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