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STRINGSTRING
Solyc12g042230.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc12g042230.1.1" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc12g042230.1.1annotation not available (93 aa)    
Predicted Functional Partners:
Solyc00g042130.1.1
annotation not available (704 aa)
 
 
  0.995
Solyc01g017220.1.1
Uncharacterized protein; ATP synthase epsilon chain (96 aa)
   
 
  0.981
101260525
Uncharacterized protein; Gamma subunit of Mt ATP synthase (324 aa)
 
 
  0.964
Solyc00g042140.1.1
annotation not available (399 aa)
 
 
  0.956
101257833
ATPase, F1 complex, gamma subunit protein (349 aa)
 
 
  0.954
101253342
ATPase, F1 complex, gamma subunit protein (377 aa)
 
 
  0.953
Solyc07g021380.1.1
annotation not available (121 aa)
   
 
  0.951
Solyc12g062630.1.1
annotation not available (134 aa)
   
 
  0.943
101248453
ATP synthase subunit d, mitochondrial; Mitochondrial membrane ATP synthase (F(1)F(0) ATP synthase or Complex V) produces ATP from ADP in the presence of a proton gradient across the membrane which is generated by electron transport complexes of the respiratory chain. F-type ATPases consist of two structural domains, F(1) - containing the extramembraneous catalytic core, and F(0) - containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the cent [...] (168 aa)
     
 
  0.941
Solyc06g005020.1.1
annotation not available (143 aa)
     
 
  0.941
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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