STRINGSTRING
Solyc12g042440.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc12g042440.1.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc12g042440.1.1Uncharacterized protein (547 aa)    
Predicted Functional Partners:
Solyc02g081620.2.1
Uncharacterized protein (361 aa)
       
 
  0.560
Solyc02g032120.2.1
Uncharacterized protein (364 aa)
       
 
  0.560
Solyc03g006350.2.1
Uncharacterized protein (695 aa)
       
 
  0.537
Solyc09g074720.1.1
Uncharacterized protein (239 aa)
     
   
  0.516
Solyc09g074690.2.1
Uncharacterized protein (308 aa)
     
   
  0.516
FALSIFLORA
FLORICAULA/LEAFY-like protein (429 aa)
           
  0.512
Solyc01g058450.2.1
Uncharacterized protein (743 aa)
           
  0.511
Solyc08g068540.2.1
Uncharacterized protein (499 aa)
           
  0.510
Solyc07g054630.2.1
Uncharacterized protein (578 aa)
           
  0.510
Solyc11g008320.1.1
Uncharacterized protein (1004 aa)
           
  0.497
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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