STRINGSTRING
Solyc12g042900.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc12g042900.1.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc12g042900.1.1Uncharacterized protein (172 aa)    
Predicted Functional Partners:
Solyc03g043850.2.1
Uncharacterized protein (89 aa)
     
  0.999
Solyc02g091880.2.1
Uncharacterized protein (100 aa)
     
  0.999
Solyc12g057120.1.1
Uncharacterized protein (178 aa)
     
  0.997
Solyc07g006270.2.1
Uncharacterized protein (77 aa)
     
  0.997
Solyc04g074550.2.1
Uncharacterized protein (185 aa)
     
  0.997
Solyc12g005630.1.1
Cytochrome b6-f complex iron-sulfur subunit (231 aa)
     
 
  0.996
Solyc11g039840.1.1
Cytochrome b-c1 complex subunit Rieske, mitochondrial ; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis (265 aa)
     
 
  0.996
Solyc08g067020.2.1
Cytochrome b-c1 complex subunit 7 ; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is part of the mitochondrial respiratory chain (123 aa)
     
 
  0.994
Solyc12g042920.1.1
Uncharacterized protein (324 aa)
     
  0.992
Solyc06g067920.2.1
Uncharacterized protein (320 aa)
     
  0.992
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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