STRINGSTRING
Solyc12g042910.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc12g042910.1.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc12g042910.1.1Uncharacterized protein (539 aa)    
Predicted Functional Partners:
Solyc10g078380.1.1
Uncharacterized protein (261 aa)
       
  0.838
Solyc03g007800.2.1
Uncharacterized protein (1294 aa)
       
  0.811
Solyc12g100310.1.1
Uncharacterized protein (602 aa)
       
  0.642
Solyc12g095830.1.1
Uncharacterized protein (705 aa)
       
  0.642
Solyc12g007280.1.1
Uncharacterized protein (375 aa)
       
  0.642
Solyc11g070170.1.1
Uncharacterized protein (692 aa)
       
  0.642
Solyc10g080700.1.1
Uncharacterized protein (709 aa)
       
  0.642
Solyc09g090250.2.1
Uncharacterized protein (464 aa)
       
  0.642
Solyc09g090240.1.1
Uncharacterized protein (195 aa)
       
  0.642
Solyc09g090230.1.1
Uncharacterized protein (116 aa)
       
  0.642
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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