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STRINGSTRING
101263496 protein (Solanum lycopersicum) - STRING interaction network
"101263496" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
101263496annotation not available (629 aa)    
Predicted Functional Partners:
3OH-1
Gibberellin 3-beta-hydroxylase 1; 3b-hydroxylase ; Belongs to the iron/ascorbate-dependent oxidoreductase family (374 aa)
           
  0.728
101254510
Membrane protein, putative (513 aa)
           
  0.645
101257523
Uncharacterised conserved protein ycf60 (204 aa)
     
   
  0.611
3OH-2
Uncharacterized protein; 3b-hydroxylase ; Belongs to the iron/ascorbate-dependent oxidoreductase family (355 aa)
           
  0.603
Solyc10g045630.1.1
Protein of unknown function (DUF3411) (262 aa)
     
   
  0.556
Solyc10g045620.1.1
annotation not available (339 aa)
     
   
  0.556
101257411
annotation not available (524 aa)
     
   
  0.556
101249509
Uncharacterized protein; Heavy metal atpase 1 (821 aa)
           
  0.554
101251442
annotation not available (559 aa)
           
  0.535
VGT1
Vacuolar glucose transporter 1; Major facilitator superfamily protein; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family (545 aa)
           
  0.523
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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