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  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
Solyc12g043030.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc12g043030.1.1" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc12g043030.1.1annotation not available (205 aa)    
Predicted Functional Partners:
101252441
GTP binding protein beta 1 (377 aa)
           
  0.633
Solyc09g082860.2.1
annotation not available (464 aa)
     
   
  0.576
101256557
annotation not available (467 aa)
     
   
  0.576
Solyc03g005250.2.1
annotation not available (424 aa)
     
   
  0.576
101252466
annotation not available (456 aa)
   
   
  0.461
LOC544267
Adenylyl-sulfate reductase (461 aa)
   
   
  0.461
101257319
annotation not available (456 aa)
   
   
  0.461
SQD1
UDP-sulfoquinovose synthase (480 aa)
           
  0.456
Solyc12g043040.1.1
annotation not available (344 aa)
 
          0.447
Solyc10g055520.1.1
annotation not available (159 aa)
       
 
  0.402
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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