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STRINGSTRING
101244463 protein (Solanum lycopersicum) - STRING interaction network
"101244463" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
101244463annotation not available (94 aa)    
Predicted Functional Partners:
101266671
Uncharacterized protein; Sequence-specific DNA binding transcription factors (343 aa)
       
      0.766
101260902
annotation not available (514 aa)
     
 
  0.661
101258079
annotation not available (511 aa)
     
 
  0.661
101268394
annotation not available (610 aa)
           
  0.572
101248592
Uncharacterized protein; Ubiquitin fusion degradation UFD1 family protein (569 aa)
     
   
  0.570
101248635
annotation not available (687 aa)
           
  0.550
Solyc03g078120.2.1
annotation not available (150 aa)
           
  0.550
101252812
Unknown protein; INVOLVED IN- biological_process unknown; LOCATED IN- chloroplast; EXPRESSED IN- 21 plant structures; EXPRESSED DURING- 13 growth stages; Has 411 Blast hits to 380 proteins in 121 species- Archae - 4; Bacteria - 107; Metazoa - 85; Fu /.../29; Plants - 59; Viruses - 0; Other Eukaryotes - 127 (source- NCBI BLink) (148 aa)
     
   
  0.456
Solyc12g017420.1.1
ABC transporter family protein (705 aa)
           
  0.450
104644277
Unknown protein; CONTAINS InterPro DOMAIN/s- Uncharacterised protein family UPF0546 (InterPro-IPR018908); Has 1807 Blast hits to 1807 proteins in 277 species- Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Euk /.../s - 339 (source- NCBI BLink) (132 aa)
           
  0.450
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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