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STRINGSTRING
Solyc12g044300.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc12g044300.1.1" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc12g044300.1.1annotation not available (324 aa)    
Predicted Functional Partners:
Solyc12g056940.1.1
annotation not available (2210 aa)
     
   
  0.817
101267567
Uncharacterized protein; Beta-ureidopropionase (410 aa)
     
    0.809
Solyc12g044290.1.1
annotation not available (237 aa)
 
          0.705
101247011
Uncharacterized protein; Mitochondrial alanine-glyoxylate transaminase ; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family (473 aa)
   
   
  0.691
101249276
Uncharacterized protein; FUNCTIONS IN- molecular_function unknown; INVOLVED IN- biological_process unknown; LOCATED IN- chloroplast thylakoid membrane, chloroplast; EXPRESSED IN- 23 plant structures; EXPRESSED DURING- 13 growth stages; BEST Arabidopsis thaliana protein matc /.../photosystem I P subunit (TAIR-AT2G46820.2); Has 291 Blast hits to 291 proteins in 50 species- Archae - 0; Bacteria - 90; Metazoa - 0; Fungi - 0; Plants - 200; Viruses - 0; Other Eukaryotes - 1 (source- NCBI BLink) (147 aa)
           
  0.683
101257095
annotation not available (534 aa)
     
  0.663
101254485
annotation not available (529 aa)
     
  0.663
101250104
Uncharacterized protein; Aldehyde dehydrogenase 2B4; Belongs to the aldehyde dehydrogenase family (535 aa)
     
  0.663
SlADH2B7b
annotation not available (473 aa)
     
  0.663
Solyc03g122310.2.1
Uncharacterized protein; Aldehyde dehydrogenase 7B4; Belongs to the aldehyde dehydrogenase family (531 aa)
   
  0.663
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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