STRINGSTRING
Solyc12g044300.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc12g044300.1.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc12g044300.1.1Uncharacterized protein (324 aa)    
Predicted Functional Partners:
Solyc08g068190.2.1
Uncharacterized protein (534 aa)
     
  0.933
Solyc06g060250.2.1
Aldehyde dehydrogenase (474 aa)
     
  0.933
Solyc05g005700.2.1
Uncharacterized protein (529 aa)
     
  0.933
Solyc03g122310.2.1
Uncharacterized protein (531 aa)
     
  0.933
Solyc03g114150.2.1
Uncharacterized protein (535 aa)
     
  0.933
Solyc02g086970.2.1
Uncharacterized protein (473 aa)
     
  0.933
Solyc01g013900.2.1
Annotation not available (81 aa)
     
  0.933
Solyc02g084660.2.1
Uncharacterized protein (225 aa)
         
    0.900
Solyc12g099440.1.1
Uncharacterized protein (727 aa)
   
  0.869
Solyc12g007170.1.1
Uncharacterized protein (724 aa)
   
  0.869
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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