STRINGSTRING
copz2 protein (Solanum lycopersicum) - STRING interaction network
"copz2" - Nonclathrin coat protein zeta2-COP in Solanum lycopersicum
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
copz2Nonclathrin coat protein zeta2-COP (183 aa)    
Predicted Functional Partners:
Solyc12g043000.1.1
Uncharacterized protein (925 aa)
     
  0.977
Solyc06g066730.2.1
Uncharacterized protein (916 aa)
     
  0.977
Solyc03g120270.2.1
Uncharacterized protein (917 aa)
     
  0.977
Solyc03g120260.2.1
Uncharacterized protein (303 aa)
     
  0.977
Solyc07g032100.2.1
Coatomer subunit alpha ; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non- clathrin-coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network (1219 aa)
     
  0.976
Solyc04g080980.2.1
Coatomer subunit alpha ; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non- clathrin-coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network (1218 aa)
     
  0.976
Solyc10g038120.1.1
Uncharacterized protein (391 aa)
     
  0.976
Solyc10g038110.1.1
Uncharacterized protein (95 aa)
     
  0.976
Solyc01g103480.2.1
Uncharacterized protein (527 aa)
     
  0.976
Solyc02g069590.2.1
Uncharacterized protein (281 aa)
     
  0.975
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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