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STRINGSTRING
Solyc12g049120.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc12g049120.1.1" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc12g049120.1.1annotation not available (348 aa)    
Predicted Functional Partners:
101267455
Bifunctional dihydrofolate reductase-thymidylate synthase; Bifunctional enzyme. Involved in de novo dTMP biosynthesis. Key enzyme in folate metabolism (527 aa)
   
   
  0.674
101268563
Unknown protein; LOCATED IN- chloroplast; Has 35333 Blast hits to 34131 proteins in 2444 species- Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source- NCBI BLink) (189 aa)
       
 
  0.648
101255999
ZRT/IRT-like protein 2 (337 aa)
     
   
  0.565
101245241
Major facilitator superfamily protein (657 aa)
           
  0.565
101265644
annotation not available (645 aa)
           
  0.565
101260479
Uncharacterized protein; Heavy metal transport/detoxification superfamily protein (427 aa)
           
  0.565
101260717
Uncharacterized protein; Peroxisomal ABC transporter 1 (1344 aa)
       
 
  0.559
PIN2
Auxin efflux carrier component; May act as a component of the auxin efflux carrier (631 aa)
     
 
  0.501
Solyc12g017350.1.1
annotation not available (316 aa)
           
  0.470
101261962
annotation not available (412 aa)
           
  0.470
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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