STRINGSTRING
Solyc12g049220.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc12g049220.1.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc12g049220.1.1Uncharacterized protein (185 aa)    
Predicted Functional Partners:
Solyc11g039910.1.1
Uncharacterized protein (233 aa)
     
  0.969
Solyc07g065200.2.1
Uncharacterized protein (209 aa)
     
  0.969
Solyc06g082270.1.1
Uncharacterized protein (236 aa)
     
  0.969
Solyc01g098230.2.1
Uncharacterized protein (498 aa)
     
  0.968
Solyc11g068980.1.1
Uncharacterized protein (169 aa)
     
  0.913
Solyc10g078690.1.1
Uncharacterized protein (208 aa)
     
  0.913
Solyc12g042900.1.1
Uncharacterized protein (172 aa)
     
  0.864
Solyc06g067940.2.1
Uncharacterized protein (177 aa)
     
  0.864
Solyc10g006020.2.1
Uncharacterized protein (359 aa)
     
  0.858
Solyc07g065400.2.1
Uncharacterized protein (201 aa)
     
  0.858
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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