STRINGSTRING
Solyc12g049410.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc12g049410.1.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc12g049410.1.1Uncharacterized protein (1016 aa)    
Predicted Functional Partners:
Solyc08g082100.2.1
Uncharacterized protein (325 aa)
     
  0.998
Solyc08g066580.2.1
Uncharacterized protein (719 aa)
     
  0.992
Solyc07g063140.1.1
Uncharacterized protein (140 aa)
     
  0.992
Solyc03g120900.1.1
Uncharacterized protein (301 aa)
     
  0.987
Solyc02g087300.1.1
Uncharacterized protein (302 aa)
     
  0.987
Solyc07g008160.2.1
Uncharacterized protein (1481 aa)
     
  0.982
Solyc04g016240.2.1
Uncharacterized protein (862 aa)
     
  0.977
Solyc05g055110.2.1
Uncharacterized protein (816 aa)
     
  0.977
Solyc04g007280.2.1
Uncharacterized protein (994 aa)
     
  0.977
Solyc03g117120.2.1
Uncharacterized protein (1012 aa)
     
  0.977
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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