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LOC543861 protein (Solanum lycopersicum) - STRING interaction network
"LOC543861" - Vacuolar H+-ATPase A1 subunit isoform in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC543861Vacuolar H+-ATPase A1 subunit isoform (623 aa)    
Predicted Functional Partners:
Solyc01g073690.2.1
Mitochondrial ATP synthesis coupled proton transport protein (246 aa)
 
  0.995
Solyc10g055670.1.1
Uncharacterized protein (479 aa)
 
0.990
Solyc01g111760.2.1
Uncharacterized protein (479 aa)
 
0.990
Solyc12g009890.1.1
Uncharacterized protein (454 aa)
     
  0.989
Solyc07g005940.2.1
Uncharacterized protein (454 aa)
     
  0.989
Solyc02g068450.2.1
Uncharacterized protein (114 aa)
   
  0.988
Solyc03g097800.2.1
Uncharacterized protein (87 aa)
     
  0.986
Solyc03g097790.2.1
Uncharacterized protein (303 aa)
     
  0.986
Solyc10g081530.1.1
Uncharacterized protein (351 aa)
   
  0.985
Solyc12g056110.1.1
Uncharacterized protein (228 aa)
   
  0.984
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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