STRINGSTRING
Solyc12g056960.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc12g056960.1.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc12g056960.1.1Uncharacterized protein (516 aa)    
Predicted Functional Partners:
Solyc04g081330.2.1
Uncharacterized protein (210 aa)
   
          0.482
Solyc11g071650.1.1
Uncharacterized protein (667 aa)
       
  0.401
Solyc11g071640.1.1
Uncharacterized protein (629 aa)
       
  0.401
SlArf/Xyl1
SlArf/Xyl1 protein (771 aa)
       
  0.401
XYL1
LEXYL1 protein (770 aa)
       
  0.401
Solyc06g076780.2.1
Uncharacterized protein (598 aa)
       
  0.401
Solyc06g073760.2.1
Uncharacterized protein (628 aa)
       
  0.401
Solyc06g073750.2.1
Uncharacterized protein (628 aa)
       
  0.401
Solyc06g073740.2.1
Uncharacterized protein (624 aa)
       
  0.401
Solyc06g005970.2.1
Uncharacterized protein (604 aa)
       
  0.401
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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