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STRINGSTRING
Solyc12g062290.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc12g062290.1.1" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc12g062290.1.1annotation not available (504 aa)    
Predicted Functional Partners:
101257828
Putative protease/hydrolase (753 aa)
           
  0.782
101249390
Uncharacterized protein; DEGP protease 5 (306 aa)
           
  0.739
101262786
annotation not available (1101 aa)
     
   
  0.693
101257915
annotation not available (1110 aa)
     
   
  0.693
101256583
Uncharacterized protein; Carboxypeptidase D, putative (485 aa)
           
  0.683
Solyc05g005860.1.1
annotation not available (372 aa)
           
  0.597
Solyc05g005850.2.1
annotation not available (344 aa)
           
  0.597
101246684
WAT1-related protein; Nodulin MtN21 /EamA-like transporter family protein (364 aa)
           
  0.597
101244285
annotation not available (251 aa)
           
  0.565
PSMD1
annotation not available (1004 aa)
       
 
  0.452
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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