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STRINGSTRING
Solyc12g062630.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc12g062630.1.1" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc12g062630.1.1annotation not available (134 aa)    
Predicted Functional Partners:
atpB
ATP synthase subunit beta, chloroplastic; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits; Belongs to the ATPase alpha/beta chains family (609 aa)
   
 
  0.996
Solyc00g042130.1.1
annotation not available (704 aa)
   
 
  0.996
Solyc11g021130.1.1
annotation not available (285 aa)
 
 
  0.995
Solyc04g049260.1.1
annotation not available (166 aa)
 
 
  0.994
Solyc00g042140.1.1
annotation not available (399 aa)
   
 
  0.994
rps16
30S ribosomal protein S16 (132 aa)
   
 
  0.990
Solyc07g008270.2.1
Ribosomal protein L36; Belongs to the bacterial ribosomal protein bL36 family (87 aa)
   
 
  0.989
101251434
Ribosomal protein S5 family protein; Belongs to the universal ribosomal protein uS5 family (502 aa)
   
 
  0.987
Solyc07g021380.1.1
annotation not available (121 aa)
   
 
  0.984
101256335
Ribosomal protein S5 domain 2-like superfamily protein; Belongs to the universal ribosomal protein uS9 family (385 aa)
   
 
  0.983
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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