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  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
Solyc12g070280.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc12g070280.1.1" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc12g070280.1.1annotation not available (231 aa)    
Predicted Functional Partners:
Solyc12g017420.1.1
ABC transporter family protein (705 aa)
     
 
  0.541
101254120
annotation not available (606 aa)
     
   
  0.525
Solyc07g008340.2.1
annotation not available (578 aa)
     
   
  0.525
101266536
Proteasome activating protein 200 (1813 aa)
     
   
  0.525
Solyc10g012190.1.1
annotation not available (687 aa)
           
  0.515
Solyc07g008610.1.1
annotation not available (695 aa)
           
  0.515
101245277
Uncharacterized protein; General control non-repressible 3 (716 aa)
     
   
  0.504
101250771
annotation not available (601 aa)
     
   
  0.488
Solyc06g074940.2.1
annotation not available (574 aa)
     
   
  0.488
101256375
annotation not available (695 aa)
     
   
  0.488
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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