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Solyc12g076350.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc12g076350.1.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc12g076350.1.1Uncharacterized protein; P-loop containing nucleoside triphosphate hydrolases superfamily protein (198 aa)    
Predicted Functional Partners:
101257469
DNA-binding HORMA family protein (208 aa)
     
 
  0.984
101266186
annotation not available (181 aa)
     
 
  0.880
101264867
DNA helicase; Minichromosome maintenance (MCM2/3/5) family protein; Belongs to the MCM family (831 aa)
     
   
  0.872
101265438
DNA replication complex GINS protein PSF2; PSF2; Belongs to the GINS2/PSF2 family (210 aa)
     
   
  0.871
101260195
ARM repeat superfamily protein (1038 aa)
     
   
  0.871
101267455
Bifunctional dihydrofolate reductase-thymidylate synthase; Bifunctional enzyme. Involved in de novo dTMP biosynthesis. Key enzyme in folate metabolism (527 aa)
     
   
  0.868
101260082
Origin recognition complex protein 5 (539 aa)
     
        0.865
101267527
Unknown protein; CONTAINS InterPro DOMAIN/s- Protein of unknown function DUF1395 (InterPro-IPR009829); Has 131 Blast hits to 131 proteins in 44 species- Archae - 0; Bacteria - 0; Metazoa - 83; Fungi - 0; Plants - 45; Viruses - 0; Other Eukaryotes - /.../rce- NCBI BLink) (265 aa)
     
   
  0.863
Solyc11g013240.1.1
Putative protein kinase 1 (741 aa)
     
   
  0.862
101264796
ARM repeat superfamily protein (1222 aa)
     
        0.858
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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