STRINGSTRING
Solyc12g077660.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc12g077660.1.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc12g077660.1.1Uncharacterized protein (63 aa)    
Predicted Functional Partners:
Solyc06g062680.1.1
Uncharacterized protein (531 aa)
     
 
  0.781
Solyc12g008940.1.1
Uncharacterized protein (374 aa)
     
 
  0.777
Solyc08g063000.2.1
Uncharacterized protein (352 aa)
     
 
  0.777
Solyc06g062690.2.1
Uncharacterized protein (349 aa)
     
 
  0.777
Solyc05g018810.2.1
Uncharacterized protein (376 aa)
     
 
  0.777
Solyc03g121700.2.1
Uncharacterized protein (372 aa)
     
 
  0.777
Solyc05g008480.2.1
Uncharacterized protein (193 aa)
     
 
  0.590
Solyc02g091110.2.1
Uncharacterized protein (193 aa)
     
 
  0.590
Solyc02g063290.2.1
Uncharacterized protein (181 aa)
     
 
  0.590
cdc5
CDC5-like protein (987 aa)
     
        0.547
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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