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Solyc12g088000.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc12g088000.1.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc12g088000.1.1Uncharacterized protein (423 aa)    
Predicted Functional Partners:
Solyc07g045050.2.1
4-hydroxyphenylpyruvate dioxygenase (441 aa)
     
 
  0.964
Solyc05g041200.2.1
4-hydroxyphenylpyruvate dioxygenase (441 aa)
     
 
  0.964
Solyc09g011870.1.1
Uncharacterized protein (390 aa)
       
  0.961
Solyc07g007590.1.1
Uncharacterized protein (377 aa)
       
  0.961
Solyc06g050630.2.1
Uncharacterized protein (272 aa)
       
  0.961
Solyc11g072520.1.1
Arogenate dehydratase ; Converts the prephenate produced from the shikimate- chorismate pathway into phenylalanine (393 aa)
       
  0.953
Solyc11g066890.1.1
Arogenate dehydratase ; Converts the prephenate produced from the shikimate- chorismate pathway into phenylalanine (427 aa)
       
  0.953
Solyc06g074530.1.1
Arogenate dehydratase ; Converts the prephenate produced from the shikimate- chorismate pathway into phenylalanine (433 aa)
       
  0.953
Solyc02g080620.2.1
Arogenate dehydratase ; Converts the prephenate produced from the shikimate- chorismate pathway into phenylalanine (400 aa)
       
  0.953
SAM2
S-adenosylmethionine synthase 2 ; Catalyzes the formation of S-adenosylmethionine from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme (By similarity) (393 aa)
   
 
  0.938
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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