STRINGSTRING
Solyc12g088250.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc12g088250.1.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc12g088250.1.1Uncharacterized protein (463 aa)    
Predicted Functional Partners:
Solyc12g098100.1.1
Uncharacterized protein (1097 aa)
       
 
  0.640
Solyc12g008500.1.1
Uncharacterized protein (1008 aa)
       
 
  0.640
Solyc12g008400.1.1
Uncharacterized protein (1204 aa)
       
 
  0.640
Solyc10g085120.1.1
Uncharacterized protein (1013 aa)
       
 
  0.640
Solyc10g079170.1.1
Uncharacterized protein (888 aa)
       
 
  0.640
Solyc09g098420.1.1
Uncharacterized protein (1270 aa)
       
 
  0.640
Solyc09g098290.2.1
Uncharacterized protein (1012 aa)
       
 
  0.640
Solyc09g091260.2.1
Non-specific serine/threonine protein kinase (1108 aa)
       
 
  0.640
Solyc09g064520.2.1
Uncharacterized protein (1020 aa)
       
 
  0.640
Solyc09g015170.2.1
Uncharacterized protein (788 aa)
       
 
  0.640
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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