STRINGSTRING
Solyc12g088530.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc12g088530.1.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc12g088530.1.1Uncharacterized protein (354 aa)    
Predicted Functional Partners:
cdkB1
B1-type cyclin dependent kinase (303 aa)
     
  0.978
cdc2A-1
Cyclin-dependent protein kinase p34cdc2 (294 aa)
     
  0.977
wee1
Protein kinase WEE1 (510 aa)
     
  0.974
Solyc11g070140.1.1
Uncharacterized protein (294 aa)
     
  0.961
Solyc08g005420.2.1
Uncharacterized protein (448 aa)
     
  0.960
Solyc06g072830.2.1
Uncharacterized protein (455 aa)
     
  0.960
cdc20-1
Cell division control 20-1 (453 aa)
     
  0.960
Solyc02g079050.2.1
Uncharacterized protein (769 aa)
     
  0.957
Solyc12g021280.1.1
Uncharacterized protein (555 aa)
     
  0.957
Solyc12g007200.1.1
Uncharacterized protein (470 aa)
     
  0.957
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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