STRINGSTRING
Solyc12g089030.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc12g089030.1.1" - Uncharacterized protein in Solanum lycopersicum
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc12g089030.1.1Uncharacterized protein (183 aa)    
Predicted Functional Partners:
Solyc01g079840.2.1
Uncharacterized protein (448 aa)
     
  0.963
Solyc12g005870.1.1
NEDD8-activating enzyme E1 regulatory subunit ; Regulatory subunit of the dimeric ECR1-AXR1 E1 enzyme. E1 activates NEDD8/RUB1 by first adenylating its C-terminal glycine residue with ATP, thereafter linking this residue to the side chain of the catalytic cysteine, yielding a NEDD8-ECR1 thioester and free AMP. E1 finally transfers NEDD8 to the catalytic cysteine of RCE1 (500 aa)
       
  0.957
Solyc11g072460.1.1
NEDD8-activating enzyme E1 regulatory subunit ; Regulatory subunit of the dimeric ECR1-AXR1 E1 enzyme. E1 activates NEDD8/RUB1 by first adenylating its C-terminal glycine residue with ATP, thereafter linking this residue to the side chain of the catalytic cysteine, yielding a NEDD8-ECR1 thioester and free AMP. E1 finally transfers NEDD8 to the catalytic cysteine of RCE1 (537 aa)
       
  0.957
Solyc12g009120.1.1
Uncharacterized protein (116 aa)
     
  0.943
Solyc06g062940.2.1
Uncharacterized protein (118 aa)
     
  0.943
LOC543732
Ubiquitin activating enzyme (318 aa)
     
  0.932
Solyc03g019730.2.1
Uncharacterized protein (346 aa)
     
  0.932
Solyc09g074680.2.1
Uncharacterized protein (740 aa)
       
  0.915
Solyc09g010050.1.1
Uncharacterized protein (735 aa)
       
  0.915
Solyc06g084520.2.1
Uncharacterized protein (740 aa)
       
  0.915
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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