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Solyc12g089210.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc12g089210.1.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc12g089210.1.1Uncharacterized protein (379 aa)    
Predicted Functional Partners:
ASS
Argininosuccinate synthase (494 aa)
 
 
  0.996
Solyc06g075340.2.1
Uncharacterized protein (1195 aa)
   
  0.991
Solyc03g043950.2.1
N-acetyl-glutamate synthase (603 aa)
   
 
  0.981
Solyc02g092260.2.1
Uncharacterized protein (594 aa)
   
 
  0.981
Solyc09g010420.2.1
Arginine biosynthesis bifunctional protein ArgJ, chloroplastic ; Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis- the synthesis of acetylglutamate from glutamate and acetyl-CoA, and of ornithine by transacetylation between acetylornithine and glutamate (470 aa)
 
 
  0.981
NAGK
Acetylglutamate kinase, chloroplastic (347 aa)
 
 
  0.969
Solyc03g115630.2.1
Uncharacterized protein (426 aa)
   
 
  0.968
Solyc08g076990.2.1
Uncharacterized protein (438 aa)
   
 
  0.965
Solyc08g076980.2.1
Uncharacterized protein (428 aa)
   
 
  0.964
Solyc08g076970.2.1
Uncharacterized protein (391 aa)
   
 
  0.964
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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