STRINGSTRING
Solyc12g094490.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc12g094490.1.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc12g094490.1.1Uncharacterized protein (975 aa)    
Predicted Functional Partners:
Solyc02g070240.2.1
Uncharacterized protein (671 aa)
     
  0.989
Solyc02g021760.2.1
Uncharacterized protein (689 aa)
     
  0.989
Solyc10g050540.1.1
Uncharacterized protein (741 aa)
     
  0.971
Solyc01g009290.2.1
Protein CLP1 homolog ; Required for endonucleolytic cleavage during polyadenylation-dependent pre-mRNA 3’-end formation (439 aa)
       
  0.967
Solyc04g057990.2.1
Uncharacterized protein (1579 aa)
     
  0.923
Solyc03g025540.2.1
Uncharacterized protein (739 aa)
     
  0.881
Solyc12g099280.1.1
Uncharacterized protein (1130 aa)
       
  0.854
Solyc07g005320.2.1
Uncharacterized protein (1380 aa)
       
  0.854
Solyc07g041000.2.1
Uncharacterized protein (202 aa)
       
  0.804
Solyc03g025880.2.1
Uncharacterized protein (200 aa)
       
  0.804
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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